No. words: 1231; after pruning: 1205


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:546)  543  0.00 0.00 0.00  MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1        1   547 (68)  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1   (69)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1   616 
   93    MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1    24 
  101  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1   516 
  309    MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1   240 
  329  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1   288 
  337    MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1   268 
  345  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1   272 
  369    MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1   300 
  473  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1   144 
  477    MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1   408 
  569  C MoSU013R_B07_BE591127Tu02P018A02P018A081R1_061.ab1    48 
  573    MoSU013F_B07_BE591127Tu02P018A02P018A081F1_061.ab1   504 
Contig length: old 684, new 684

Contig length: old 684, new 684
New start: 0