No. words: 1490; after pruning: 1450


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:883)  588  0.17 0.00 0.00  MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1      143   748 (0)  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   (0)   742   137 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1     1 
  370  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   515 
  374    MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1   374 
  378  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   507 
  382    MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1   382 
  402  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   483 
  414    MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1   414 
  418  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   467 
  442    MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1   442 
  450  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   435 
  470    MoSU003F_C11_BE591305As01P005A01A071F1_082.ab1   470 
  482  C MoSU003R_C11_BE591305As01P005A01A071R1_082.ab1   403 
Contig length: old 884, new 884

Contig length: old 884, new 884
New start: 0 
S Change at: 46; seg lengths: entry 1, contig 1