No. words: 1445; after pruning: 1419


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:591)  573  0.00 0.00 0.17  MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1        1   592 (111)  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   (151)   591     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   742 
  159    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1     8 
  163  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   580 
  167    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1    16 
  175  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   568 
  208    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1    58 
  212  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   531 
  220    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1    70 
  224  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   519 
  240    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1    90 
  248  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   495 
  272    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   122 
  280  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   463 
  312    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   162 
  316  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   427 
  336    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   186 
  348  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   395 
  356    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   206 
  360  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   383 
  420    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   270 
  428  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   315 
  532    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   382 
  536  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   207 
  580    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   430 
  588  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1   155 
  708    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   558 
  712  C MoSU003R_G11_BE591305Ld01P005A01A071R1_084.ab1    31 
  736    MoSU003F_G11_BE591305Ld01P005A01A071F1_084.ab1   586 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0