No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:488)  470  0.00 0.00 0.20  MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1        1   489 (130)  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   (164)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   652 
  243    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1    80 
  259  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   394 
  271    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1   108 
  279  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   374 
  283    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1   120 
  291  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   362 
  367    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1   204 
  371  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   282 
  487    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1   324 
  503  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1   150 
  627    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1   464 
  631  C MoSU003R_B12_BE591305Ld03P005A01A071R1_093.ab1    22 
  647    MoSU003F_B12_BE591305Ld03P005A01A071F1_093.ab1   484 
Contig length: old 782, new 782

Contig length: old 782, new 782
New start: 0