No. words: 1494; after pruning: 1468


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:871)  603  0.00 0.16 0.00  MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1      110   730 (0)  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   (0)   764   143 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1     1 
  291  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   582 
  295    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1   295 
  387  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   486 
  391    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1   391 
  403  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   470 
  407    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1   407 
  411  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   462 
  415    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1   415 
  435  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   438 
  439    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1   439 
  443  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   430 
  455    MoSU003F_D12_BE591305Ld05P005A01A071F1_094.ab1   455 
  459  C MoSU003R_D12_BE591305Ld05P005A01A071R1_094.ab1   414 
Contig length: old 872, new 872

Contig length: old 872, new 872
New start: 0