No. words: 1350; after pruning: 1324


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:661)  626  0.31 0.00 0.00  MoSU019F_G12_BE591305Sn24P023H11P005A071F1_084.ab1       20   662 (45)  C MoSU019R_G12_BE591305Sn24P023H11P005A071R1_084.ab1   (0)   643     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1    MoSU019F_G12_BE591305Sn24P023H11P005A071F1_084.ab1     1 
   27  C MoSU019R_G12_BE591305Sn24P023H11P005A071R1_084.ab1   636 
   47    MoSU019F_G12_BE591305Sn24P023H11P005A071F1_084.ab1    47 
   83  C MoSU019R_G12_BE591305Sn24P023H11P005A071R1_084.ab1   580 
   91    MoSU019F_G12_BE591305Sn24P023H11P005A071F1_084.ab1    91 
  107  C MoSU019R_G12_BE591305Sn24P023H11P005A071R1_084.ab1   556 
  111    MoSU019F_G12_BE591305Sn24P023H11P005A071F1_084.ab1   111 
  527  C MoSU019R_G12_BE591305Sn24P023H11P005A071R1_084.ab1   136 
  571    MoSU019F_G12_BE591305Sn24P023H11P005A071F1_084.ab1   571 
Contig length: old 707, new 707

Contig length: old 707, new 707
New start: 0