No. words: 445; after pruning: 419


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.3 (1,1:168)  136  2.94 0.00 1.18  MoSU029F_A07_BE591305Ta11P005A01P023H121F1_063.ab1        1   170 (42)  C MoSU029R_A07_BE591305Ta11P005A01P023H121R1_063.ab1   (65)   168     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  76 nodes

 40 str. conn. components

Path
    1  C MoSU029R_A07_BE591305Ta11P005A01P023H121R1_063.ab1   233 
  186    MoSU029F_A07_BE591305Ta11P005A01P023H121F1_063.ab1   121 
Contig length: old 276, new 277

Contig length: old 277, new 277
New start: 0