No. words: 1030; after pruning: 1004


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 6.2 (1,1:661)  313  0.31 0.00 0.00  MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1      344   661 (50)  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1   (0)   319     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1     1 
  475  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1   188 
  483    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1   483 
  491  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1   172 
  523    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1   523 
  527  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1   136 
  567    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1   567 
  583  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1    80 
  595    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1   595 
  611  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1    52 
  615    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1   615 
  643  C MoSU019R_A11_BE591305Ta11P023H11P005A071R1_095.ab1    20 
  647    MoSU019F_A11_BE591305Ta11P023H11P005A071F1_095.ab1   647 
Contig length: old 711, new 711

Contig length: old 711, new 711
New start: 0