No. words: 1024; after pruning: 998


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 4.8 (1,1:661)  303  0.00 0.00 0.32  MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1      352   661 (47)  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1   (5)   311     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1     1 
  451  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1   212 
  455    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1   455 
  459  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1   204 
  467    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1   467 
  471  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1   192 
  483    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1   483 
  495  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1   168 
  623    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1   623 
  627  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1    36 
  631    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1   631 
  635  C MoSU019R_B11_BE591305Ta12P023H11P005A071R1_093.ab1    28 
  639    MoSU019F_B11_BE591305Ta12P023H11P005A071F1_093.ab1   639 
Contig length: old 708, new 708

Contig length: old 708, new 708
New start: 0