No. words: 1060; after pruning: 1034


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.6 (1,1:651)  345  0.28 0.00 0.00  MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1      302   652 (57)  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1   (0)   351     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1     1 
  457  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1   196 
  465    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1   465 
  497  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1   156 
  505    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1   505 
  513  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1   140 
  521    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1   521 
  529  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1   124 
  569    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1   569 
  577  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1    76 
  597    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1   597 
  613  C MoSU019R_E11_BE591305Ta15P023H11P005A071R1_087.ab1    40 
  617    MoSU019F_E11_BE591305Ta15P023H11P005A071F1_087.ab1   617 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0