No. words: 1070; after pruning: 1044


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.3 (1,1:659)  332  1.97 0.00 0.00  MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1      305   660 (53)  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1   (1)   356     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  162 nodes

 83 str. conn. components

Path
    1    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1     1 
  459  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1   202 
  467    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1   467 
  471  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1   190 
  483    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1   483 
  515  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1   146 
  519    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1   519 
  531  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1   130 
  571    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1   571 
  579  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1    82 
  587    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1   587 
  595  C MoSU019R_G11_BE591305Ta17P023H11P005A071R1_083.ab1    66 
  599    MoSU019F_G11_BE591305Ta17P023H11P005A071F1_083.ab1   599 
Contig length: old 713, new 713

Contig length: old 713, new 713
New start: 0