No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:662)  628  0.31 0.00 0.00  MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1       19   663 (48)  C MoSU019R_A12_BE591305Ta18P023H11P005A071R1_096.ab1   (0)   645     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1    MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1     1 
   61  C MoSU019R_A12_BE591305Ta18P023H11P005A071R1_096.ab1   603 
   65    MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1    65 
   85  C MoSU019R_A12_BE591305Ta18P023H11P005A071R1_096.ab1   579 
   89    MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1    89 
  109  C MoSU019R_A12_BE591305Ta18P023H11P005A071R1_096.ab1   555 
  113    MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1   113 
  546  C MoSU019R_A12_BE591305Ta18P023H11P005A071R1_096.ab1   118 
  570    MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1   570 
  586  C MoSU019R_A12_BE591305Ta18P023H11P005A071R1_096.ab1    78 
  618    MoSU019F_A12_BE591305Ta18P023H11P005A071F1_096.ab1   618 
Contig length: old 711, new 711

Contig length: old 711, new 711
New start: 0