No. words: 1090; after pruning: 1064


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:653)  366  0.27 0.00 0.00  MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1      282   654 (63)  C MoSU019R_D12_BE591305Ta21P023H11P005A071R1_090.ab1   (0)   373     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1    MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1     1 
  453  C MoSU019R_D12_BE591305Ta21P023H11P005A071R1_090.ab1   202 
  477    MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1   477 
  513  C MoSU019R_D12_BE591305Ta21P023H11P005A071R1_090.ab1   142 
  573    MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1   573 
  585  C MoSU019R_D12_BE591305Ta21P023H11P005A071R1_090.ab1    70 
  601    MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1   601 
  609  C MoSU019R_D12_BE591305Ta21P023H11P005A071R1_090.ab1    46 
  621    MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1   621 
  639  C MoSU019R_D12_BE591305Ta21P023H11P005A071R1_090.ab1    16 
  643    MoSU019F_D12_BE591305Ta21P023H11P005A071F1_090.ab1   643 
Contig length: old 717, new 717

Contig length: old 717, new 717
New start: 0