No. words: 464; after pruning: 438


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 1.8 (1,1:176)  152  0.00 0.00 1.16  MoSU029F_D08_BE591305Ta22P005A01P023H121F1_058.ab1        1   172 (51)  C MoSU029R_D08_BE591305Ta22P005A01P023H121R1_058.ab1   (65)   176     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  80 nodes

 42 str. conn. components

Path
    1  C MoSU029R_D08_BE591305Ta22P005A01P023H121R1_058.ab1   241 
  189    MoSU029F_D08_BE591305Ta22P005A01P023H121F1_058.ab1   124 
Contig length: old 287, new 288

Contig length: old 288, new 288
New start: 0