No. words: 1319; after pruning: 1293


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:658)  590  0.00 0.00 0.17  MoSU019F_E12_BE591305Ta22P023H11P005A071F1_088.ab1       57   660 (56)  C MoSU019R_E12_BE591305Ta22P023H11P005A071R1_088.ab1   (0)   603     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1    MoSU019F_E12_BE591305Ta22P023H11P005A071F1_088.ab1     1 
  512  C MoSU019R_E12_BE591305Ta22P023H11P005A071R1_088.ab1   148 
  568    MoSU019F_E12_BE591305Ta22P023H11P005A071F1_088.ab1   568 
  580  C MoSU019R_E12_BE591305Ta22P023H11P005A071R1_088.ab1    80 
  592    MoSU019F_E12_BE591305Ta22P023H11P005A071F1_088.ab1   592 
  612  C MoSU019R_E12_BE591305Ta22P023H11P005A071R1_088.ab1    48 
  616    MoSU019F_E12_BE591305Ta22P023H11P005A071F1_088.ab1   616 
Contig length: old 716, new 716

Contig length: old 716, new 716
New start: 0