No. words: 457; after pruning: 431


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 2.5 (1,1:166)  136  3.05 0.00 0.61  MoSU029F_E08_BE591305Ta23P005A01P023H121F1_056.ab1        1   164 (61)  C MoSU029R_E08_BE591305Ta23P005A01P023H121R1_056.ab1   (66)   166     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  76 nodes

 40 str. conn. components

Path
    1  C MoSU029R_E08_BE591305Ta23P005A01P023H121R1_056.ab1   232 
  188    MoSU029F_E08_BE591305Ta23P005A01P023H121F1_056.ab1   122 
Contig length: old 290, new 291

Contig length: old 291, new 291
New start: 0