No. words: 1207; after pruning: 1181


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:657)  468  0.82 0.00 0.00  MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1      173   658 (63)  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1   (0)   486     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1     1 
  461  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1   198 
  473    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   473 
  481  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1   178 
  493    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   493 
  517  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1   142 
  525    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   525 
  537  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1   122 
  577    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   577 
  585  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1    74 
  609    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   609 
  617  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1    42 
  629    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   629 
  641  C MoSU019R_G09_BE591305Td01P023H11P005A071R1_067.ab1    18 
  653    MoSU019F_G09_BE591305Td01P023H11P005A071F1_067.ab1   653 
Contig length: old 721, new 721

Contig length: old 721, new 721
New start: 0