No. words: 1089; after pruning: 1063


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:660)  368  1.04 0.00 0.00  MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1      278   661 (44)  C MoSU019R_C10_BE591305Td05P023H11P005A071R1_076.ab1   (0)   384     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1    MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1     1 
  458  C MoSU019R_C10_BE591305Td05P023H11P005A071R1_076.ab1   204 
  470    MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1   470 
  482  C MoSU019R_C10_BE591305Td05P023H11P005A071R1_076.ab1   180 
  502    MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1   502 
  514  C MoSU019R_C10_BE591305Td05P023H11P005A071R1_076.ab1   148 
  570    MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1   570 
  586  C MoSU019R_C10_BE591305Td05P023H11P005A071R1_076.ab1    76 
  598    MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1   598 
  614  C MoSU019R_C10_BE591305Td05P023H11P005A071R1_076.ab1    48 
  618    MoSU019F_C10_BE591305Td05P023H11P005A071F1_076.ab1   618 
Contig length: old 705, new 705

Contig length: old 705, new 705
New start: 0