No. words: 1174; after pruning: 1148


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:650)  442  0.86 0.22 0.00  MoSU019F_D10_BE591305Td06P023H11P005A071F1_074.ab1      188   651 (58)  C MoSU019R_D10_BE591305Td06P023H11P005A071R1_074.ab1   (0)   465     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1    MoSU019F_D10_BE591305Td06P023H11P005A071F1_074.ab1     1 
  455  C MoSU019R_D10_BE591305Td06P023H11P005A071R1_074.ab1   197 
  571    MoSU019F_D10_BE591305Td06P023H11P005A071F1_074.ab1   571 
  579  C MoSU019R_D10_BE591305Td06P023H11P005A071R1_074.ab1    73 
  599    MoSU019F_D10_BE591305Td06P023H11P005A071F1_074.ab1   599 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0