No. words: 1231; after pruning: 1205


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:676)  498  0.39 0.00 0.00  MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1      166   677 (42)  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1   (0)   512     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1     1 
  566  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1   112 
  570    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1   570 
  574  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1   104 
  582    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1   582 
  590  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1    88 
  614    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1   614 
  622  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1    56 
  634    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1   634 
  638  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1    40 
  642    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1   642 
  650  C MoSU019R_E10_BE591305Td07P023H11P005A071R1_072.ab1    28 
  654    MoSU019F_E10_BE591305Td07P023H11P005A071F1_072.ab1   654 
Contig length: old 719, new 719

Contig length: old 719, new 719
New start: 0