No. words: 1088; after pruning: 1062


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:680)  358  0.27 0.00 0.00  MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1      317   681 (42)  C MoSU019R_H10_BE591305Td10P023H11P005A071R1_066.ab1   (0)   365     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1    MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1     1 
  525  C MoSU019R_H10_BE591305Td10P023H11P005A071R1_066.ab1   157 
  533    MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1   533 
  541  C MoSU019R_H10_BE591305Td10P023H11P005A071R1_066.ab1   141 
  573    MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1   573 
  577  C MoSU019R_H10_BE591305Td10P023H11P005A071R1_066.ab1   105 
  585    MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1   585 
  589  C MoSU019R_H10_BE591305Td10P023H11P005A071R1_066.ab1    93 
  617    MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1   617 
  621  C MoSU019R_H10_BE591305Td10P023H11P005A071R1_066.ab1    61 
  637    MoSU019F_H10_BE591305Td10P023H11P005A071F1_066.ab1   637 
Contig length: old 723, new 723

Contig length: old 723, new 723
New start: 0