No. words: 1056; after pruning: 1030


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:488)  471  0.00 0.00 0.20  MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1        1   489 (30)  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   (49)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   537 
  117    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1    69 
  125  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   413 
  205    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   157 
  217  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   321 
  225    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   177 
  241  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   297 
  281    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   233 
  285  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   253 
  313    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   265 
  317  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   221 
  329    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   281 
  337  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   201 
  373    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   325 
  381  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   157 
  393    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   345 
  397  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1   141 
  457    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   409 
  461  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1    77 
  473    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   425 
  481  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1    57 
  493    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   445 
  497  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1    41 
  501    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   453 
  505  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1    33 
  513    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   465 
  517  C MoSU003R_A11_BE591305Tu01P005A01A071R1_081.ab1    21 
  529    MoSU003F_A11_BE591305Tu01P005A01A071F1_081.ab1   481 
Contig length: old 567, new 567

Contig length: old 567, new 567
New start: 0