No. words: 910; after pruning: 884


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.4 (1,1:290)  278  0.00 0.34 0.34  MoSU007F_A08_BE591737Ld03P015F04F101F1_064.ab1        1   291 (171)  C MoSU007R_A08_BE591737Ld03P015F04F101R1_064.ab1   (157)   291     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C MoSU007R_A08_BE591737Ld03P015F04F101R1_064.ab1   448 
  304    MoSU007F_A08_BE591737Ld03P015F04F101F1_064.ab1   146 
Contig length: old 619, new 620

Contig length: old 620, new 620
New start: 0