No. words: 654; after pruning: 628


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)   17   -0.8 -0.8 (1,1:329)  154  1.18 0.00 0.59  MoSU002F_G09_BE591737Ld07P005C02C081F2_068.ab1        1   169 (17)  C MoSU002R_G09_BE591737Ld07P005C02C081R2_068.ab1   (139)   329   162 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.8       1        0

Gap   # merges  # failures
 size
17       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  80 nodes

 42 str. conn. components

Path
    1  C MoSU002R_G09_BE591737Ld07P005C02C081R2_068.ab1   468 
Contig length: old 468, new 468

Contig length: old 468, new 468
New start: 0