No. words: 622; after pruning: 596


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.5 (1,1:262)  244  0.76 0.38 0.38  MoSU007F_B07_BE591737Tu02P015F04F101F1_061.ab1        1   263 (48)  C MoSU007R_B07_BE591737Tu02P015F04F101R1_061.ab1   (48)   263     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  124 nodes

 64 str. conn. components

Path
    1  C MoSU007R_B07_BE591737Tu02P015F04F101R1_061.ab1   311 
  151    MoSU007F_B07_BE591737Tu02P015F04F101F1_061.ab1   102 
  175  C MoSU007R_B07_BE591737Tu02P015F04F101R1_061.ab1   137 
  183    MoSU007F_B07_BE591737Tu02P015F04F101F1_061.ab1   134 
Contig length: old 359, new 360

Contig length: old 360, new 360
New start: 0