No. words: 401; after pruning: 375


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 1.9 (1,1:155)  139  0.00 0.00 0.67  MoSU020F_D04_BE591996Td04P020E02P005G071F1_026.ab1        6   155 (40)  C MoSU020R_D04_BE591996Td04P020E02P005G071R1_026.ab1   (56)   150     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1  C MoSU020R_D04_BE591996Td04P020E02P005G071R1_026.ab1   206 
  168    MoSU020F_D04_BE591996Td04P020E02P005G071F1_026.ab1   117 
Contig length: old 245, new 246

Contig length: old 246, new 246
New start: 0