No. words: 1297; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:615)  599  0.00 0.00 0.00  MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1        1   616 (38)  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   (27)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   643 
   35    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1     8 
   43  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   601 
   51    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1    24 
   63  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   581 
   67    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1    40 
  123  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   521 
  127    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   100 
  131  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   513 
  135    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   108 
  155  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   489 
  171    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   144 
  183  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   461 
  215    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   188 
  283  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   361 
  339    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   312 
  351  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   293 
  359    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   332 
  363  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   281 
  379    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   352 
  383  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   261 
  407    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   380 
  411  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   233 
  427    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   400 
  443  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   201 
  535    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   508 
  539  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1   105 
  547    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   520 
  551  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1    93 
  559    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   532 
  563  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1    81 
  607    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   580 
  611  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1    33 
  627    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   600 
  635  C MoSU004R_E03_BE605054At01P005E03E091R1_019.ab1     9 
  639    MoSU004F_E03_BE605054At01P005E03E091F1_019.ab1   612 
Contig length: old 681, new 681

Contig length: old 681, new 681
New start: 0