No. words: 1572; after pruning: 1546


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:667)  641  0.30 0.00 0.15  MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1        1   668 (121)  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   (116)   667     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   783 
  120    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1     4 
  124  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   660 
  128    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1    12 
  132  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   652 
  136    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1    20 
  140  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   644 
  151    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1    35 
  175  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   609 
  179    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1    63 
  207  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   577 
  211    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1    95 
  291  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   493 
  303    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   187 
  307  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   477 
  315    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   199 
  355  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   429 
  371    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   255 
  383  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   401 
  403    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   287 
  423  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   361 
  451    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   335 
  455  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   329 
  471    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   355 
  475  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   309 
  487    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   371 
  491  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   293 
  503    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   387 
  511  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   273 
  523    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   407 
  531  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1   253 
  719    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   603 
  723  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1    61 
  747    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   631 
  766  C MoSU004R_B04_BE605054Ld04P005E03E091R1_029.ab1    18 
  770    MoSU004F_B04_BE605054Ld04P005E03E091F1_029.ab1   654 
Contig length: old 904, new 905

Contig length: old 905, new 905
New start: 0