No. words: 1566; after pruning: 1526


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:676)  648  0.15 0.15 0.15  MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1        1   677 (98)  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   (114)   677     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   791 
  135    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1    20 
  139  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   653 
  147    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1    32 
  191  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   601 
  195    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1    80 
  203  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   589 
  207    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1    92 
  295  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   497 
  323    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   208 
  355  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   437 
  363    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   248 
  395  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   397 
  558    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   443 
  566  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   226 
  642    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   527 
  650  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   142 
  658    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   543 
  662  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1   130 
  722    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   607 
  726  C MoSU004R_D04_BE605054Ld06P005E03E091R1_030.ab1    66 
  770    MoSU004F_D04_BE605054Ld06P005E03E091F1_030.ab1   655 
Contig length: old 889, new 890

Contig length: old 890, new 890
New start: 0