No. words: 1589; after pruning: 1563


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.8 (1,1:667)  640  0.15 0.15 0.00  MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1        1   664 (130)  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   (126)   669     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   795 
  138    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1    11 
  150  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   646 
  162    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1    35 
  186  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   610 
  190    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1    63 
  286  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   510 
  290    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   163 
  306  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   490 
  322    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   195 
  370  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   426 
  378    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   251 
  406  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   390 
  414    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   287 
  418  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   378 
  422    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   295 
  434  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   362 
  462    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   335 
  498  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   298 
  546    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   419 
  554  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   242 
  566    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   439 
  586  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   210 
  634    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   507 
  658  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   138 
  666    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   539 
  674  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   122 
  682    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   555 
  686  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1   110 
  694    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   567 
  726  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1    70 
  742    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   615 
  754  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1    42 
  762    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   635 
  774  C MoSU004R_F04_BE605054Ld08P005E03E091R1_031.ab1    22 
  778    MoSU004F_F04_BE605054Ld08P005E03E091F1_031.ab1   651 
Contig length: old 921, new 921

Contig length: old 921, new 921
New start: 0