No. words: 1605; after pruning: 1579


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:681)  654  0.00 0.15 0.15  MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1        1   682 (119)  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   (122)   682     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   804 
  144    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1    21 
  152  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   653 
  164    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1    41 
  188  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   617 
  192    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1    69 
  204  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   601 
  216    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1    93 
  312  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   493 
  316    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   193 
  376  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   429 
  380    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   257 
  408  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   397 
  424    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   301 
  440  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   365 
  464    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   341 
  468  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   337 
  480    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   357 
  484  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   321 
  564    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   441 
  584  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   221 
  644    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   521 
  660  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   145 
  668    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   545 
  680  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   125 
  684    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   561 
  692  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1   113 
  708    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   585 
  712  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1    93 
  724    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   601 
  728  C MoSU004R_H04_BE605054Ld10P005E03E091R1_032.ab1    77 
  772    MoSU004F_H04_BE605054Ld10P005E03E091F1_032.ab1   649 
Contig length: old 923, new 924

Contig length: old 924, new 924
New start: 0