No. words: 1057; after pruning: 1031


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.4 (1,1:480)  464  0.00 0.00 0.00  MoSU030F_A12_BE605054Sn26P024G01P005E091F1_096.ab1        4   481 (47)  C MoSU030R_A12_BE605054Sn26P024G01P005E091R1_096.ab1   (51)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU030R_A12_BE605054Sn26P024G01P005E091R1_096.ab1   529 
  400    MoSU030F_A12_BE605054Sn26P024G01P005E091F1_096.ab1   352 
  472  C MoSU030R_A12_BE605054Sn26P024G01P005E091R1_096.ab1    58 
  488    MoSU030F_A12_BE605054Sn26P024G01P005E091F1_096.ab1   440 
Contig length: old 576, new 576

Contig length: old 576, new 576
New start: 0