No. words: 1072; after pruning: 1046


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 6.9 (1,1:495)  469  0.00 0.00 0.20  MoSU030F_C12_BE605054Sn28P024G01P005E091F1_092.ab1        8   496 (37)  C MoSU030R_C12_BE605054Sn28P024G01P005E091R1_092.ab1   (51)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C MoSU030R_C12_BE605054Sn28P024G01P005E091R1_092.ab1   539 
  416    MoSU030F_C12_BE605054Sn28P024G01P005E091F1_092.ab1   372 
  424  C MoSU030R_C12_BE605054Sn28P024G01P005E091R1_092.ab1   116 
  428    MoSU030F_C12_BE605054Sn28P024G01P005E091F1_092.ab1   384 
  472  C MoSU030R_C12_BE605054Sn28P024G01P005E091R1_092.ab1    68 
  476    MoSU030F_C12_BE605054Sn28P024G01P005E091F1_092.ab1   432 
Contig length: old 576, new 577

Contig length: old 577, new 577
New start: 0