No. words: 1080; after pruning: 1054


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.0 (1,1:481)  466  0.00 0.00 0.00  MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1        3   482 (55)  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1   (63)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1   543 
  140    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1    79 
  144  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1   400 
  156    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1    95 
  160  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1   384 
  176    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   115 
  188  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1   356 
  196    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   135 
  200  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1   344 
  440    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   379 
  448  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1    96 
  472    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   411 
  476  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1    68 
  484    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   423 
  496  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1    48 
  500    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   439 
  504  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1    40 
  516    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   455 
  532  C MoSU030R_D12_BE605054Sn29P024G01P005E091R1_090.ab1    12 
  540    MoSU030F_D12_BE605054Sn29P024G01P005E091F1_090.ab1   479 
Contig length: old 598, new 598

Contig length: old 598, new 598
New start: 0