No. words: 1036; after pruning: 1010


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:508)  464  0.41 0.00 0.20  MoSU030F_A10_BE605054Ta11P024G01P005E091F1_080.ab1       22   510 (38)  C MoSU030R_A10_BE605054Ta11P024G01P005E091R1_080.ab1   (0)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1    MoSU030F_A10_BE605054Ta11P024G01P005E091F1_080.ab1     1 
   82  C MoSU030R_A10_BE605054Ta11P024G01P005E091R1_080.ab1   428 
   86    MoSU030F_A10_BE605054Ta11P024G01P005E091F1_080.ab1    86 
  162  C MoSU030R_A10_BE605054Ta11P024G01P005E091R1_080.ab1   348 
  166    MoSU030F_A10_BE605054Ta11P024G01P005E091F1_080.ab1   166 
  326  C MoSU030R_A10_BE605054Ta11P024G01P005E091R1_080.ab1   184 
  386    MoSU030F_A10_BE605054Ta11P024G01P005E091F1_080.ab1   386 
  394  C MoSU030R_A10_BE605054Ta11P024G01P005E091R1_080.ab1   116 
  398    MoSU030F_A10_BE605054Ta11P024G01P005E091F1_080.ab1   398 
Contig length: old 548, new 548

Contig length: old 548, new 548
New start: 0