No. words: 1079; after pruning: 1053


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.2 (1,1:493)  476  0.00 0.00 0.00  MoSU030F_E10_BE605054Ta15P024G01P005E091F1_072.ab1        5   494 (46)  C MoSU030R_E10_BE605054Ta15P024G01P005E091R1_072.ab1   (49)   490     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C MoSU030R_E10_BE605054Ta15P024G01P005E091R1_072.ab1   539 
  109    MoSU030F_E10_BE605054Ta15P024G01P005E091F1_072.ab1    64 
  117  C MoSU030R_E10_BE605054Ta15P024G01P005E091R1_072.ab1   423 
  425    MoSU030F_E10_BE605054Ta15P024G01P005E091F1_072.ab1   380 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0