No. words: 1063; after pruning: 1037


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:488)  468  0.20 0.00 0.20  MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1        1   489 (33)  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1   (53)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1   541 
  105    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1    52 
  113  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1   429 
  289    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1   236 
  297  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1   245 
  433    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1   380 
  437  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1   105 
  477    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1   424 
  481  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1    61 
  493    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1   440 
  497  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1    45 
  518    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1   465 
  522  C MoSU030R_A11_BE605054Ta19P024G01P005E091R1_095.ab1    20 
  530    MoSU030F_A11_BE605054Ta19P024G01P005E091F1_095.ab1   477 
Contig length: old 574, new 575

Contig length: old 575, new 575
New start: 0