No. words: 1081; after pruning: 1055


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:503)  482  0.00 0.20 0.20  MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1        1   504 (32)  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1   (41)   504     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1   545 
  108    MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1    66 
  116  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1   430 
  436    MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1   394 
  440  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1   106 
  468    MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1   426 
  472  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1    74 
  492    MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1   450 
  500  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1    46 
  508    MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1   466 
  516  C MoSU030R_B11_BE605054Ta20P024G01P005E091R1_093.ab1    30 
  520    MoSU030F_B11_BE605054Ta20P024G01P005E091F1_093.ab1   478 
Contig length: old 577, new 578

Contig length: old 578, new 578
New start: 0