No. words: 1069; after pruning: 1043


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:490)  467  0.41 0.00 0.20  MoSU030F_C11_BE605054Ta21P024G01P005E091F1_091.ab1        1   491 (35)  C MoSU030R_C11_BE605054Ta21P024G01P005E091R1_091.ab1   (53)   490     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU030R_C11_BE605054Ta21P024G01P005E091R1_091.ab1   543 
  403    MoSU030F_C11_BE605054Ta21P024G01P005E091F1_091.ab1   350 
  415  C MoSU030R_C11_BE605054Ta21P024G01P005E091R1_091.ab1   129 
  427    MoSU030F_C11_BE605054Ta21P024G01P005E091F1_091.ab1   374 
  435  C MoSU030R_C11_BE605054Ta21P024G01P005E091R1_091.ab1   109 
  459    MoSU030F_C11_BE605054Ta21P024G01P005E091F1_091.ab1   406 
  467  C MoSU030R_C11_BE605054Ta21P024G01P005E091R1_091.ab1    77 
  471    MoSU030F_C11_BE605054Ta21P024G01P005E091F1_091.ab1   418 
  479  C MoSU030R_C11_BE605054Ta21P024G01P005E091R1_091.ab1    65 
  483    MoSU030F_C11_BE605054Ta21P024G01P005E091F1_091.ab1   430 
Contig length: old 578, new 579

Contig length: old 579, new 579
New start: 0