No. words: 949; after pruning: 923


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   12    0.0 5.5 (1,1:494)  343  2.83 0.00 0.00  MoSU030F_E11_BE605054Ta23P024G01P005E091F1_087.ab1       13   401 (0)  C MoSU030R_E11_BE605054Ta23P024G01P005E091R1_087.ab1   (65)   483    95 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
12       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C MoSU030R_E11_BE605054Ta23P024G01P005E091R1_087.ab1   548 
   77    MoSU030F_E11_BE605054Ta23P024G01P005E091F1_087.ab1    24 
   81  C MoSU030R_E11_BE605054Ta23P024G01P005E091R1_087.ab1   468 
  243    MoSU030F_E11_BE605054Ta23P024G01P005E091F1_087.ab1   190 
  251  C MoSU030R_E11_BE605054Ta23P024G01P005E091R1_087.ab1   298 
  267    MoSU030F_E11_BE605054Ta23P024G01P005E091F1_087.ab1   214 
  271  C MoSU030R_E11_BE605054Ta23P024G01P005E091R1_087.ab1   278 
Contig length: old 548, new 548

Contig length: old 548, new 548
New start: 0