No. words: 805; after pruning: 779


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:356)  328  0.28 0.00 0.56  MoSU030F_G04_BE605054Td07P024E01P005E091F1_020.ab1        1   357 (45)  C MoSU030R_G04_BE605054Td07P024E01P005E091R1_020.ab1   (47)   356     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C MoSU030R_G04_BE605054Td07P024E01P005E091R1_020.ab1   403 
  255    MoSU030F_G04_BE605054Td07P024E01P005E091F1_020.ab1   208 
  327  C MoSU030R_G04_BE605054Td07P024E01P005E091R1_020.ab1    77 
  335    MoSU030F_G04_BE605054Td07P024E01P005E091F1_020.ab1   288 
Contig length: old 448, new 449

Contig length: old 449, new 449
New start: 0