No. words: 1277; after pruning: 1251


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:591)  573  0.17 0.00 0.00  MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1        1   592 (86)  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   (7)   592     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   599 
   11    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1     4 
   19  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   581 
   23    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1    16 
  178  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   422 
  186    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   179 
  202  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   398 
  206    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   199 
  250  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   350 
  258    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   251 
  266  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   334 
  294    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   287 
  302  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   298 
  306    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   299 
  322  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1   278 
  510    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   503 
  514  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1    86 
  522    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   515 
  526  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1    74 
  554    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   547 
  558  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1    42 
  570    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   563 
  574  C MoSU004R_A03_BE605054Tu01P005E03E091R1_017.ab1    26 
  594    MoSU004F_A03_BE605054Tu01P005E03E091F1_017.ab1   587 
Contig length: old 685, new 685

Contig length: old 685, new 685
New start: 0