No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.8 (1,1:651)  632  0.00 0.00 0.00  MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1        3   652 (27)  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   (26)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   676 
   30    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1     6 
   38  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   639 
   46    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1    22 
  138  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   539 
  142    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   118 
  198  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   479 
  202    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   178 
  234  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   443 
  238    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   214 
  258  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   419 
  266    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   242 
  294  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   383 
  314    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   290 
  322  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   355 
  330    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   306 
  334  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   343 
  434    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   410 
  474  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   203 
  526    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   502 
  542  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   135 
  554    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   530 
  562  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   115 
  570    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   546 
  574  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1   103 
  590    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   566 
  610  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1    67 
  618    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   594 
  622  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1    55 
  630    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   606 
  638  C MoSU004R_B03_BE605054Tu02P005E03E091R1_025.ab1    39 
  642    MoSU004F_B03_BE605054Tu02P005E03E091F1_025.ab1   618 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0