No. words: 933; after pruning: 907


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 2.8 (1,1:307)  292  0.00 0.33 0.33  MoSU009F_H07_BE637663Ld02P015B03P015B091F1_049.ab1        1   305 (153)  C MoSU009R_H07_BE637663Ld02P015B03P015B091R1_049.ab1   (167)   308     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1  C MoSU009R_H07_BE637663Ld02P015B03P015B091R1_049.ab1   475 
  323    MoSU009F_H07_BE637663Ld02P015B03P015B091F1_049.ab1   155 
  347  C MoSU009R_H07_BE637663Ld02P015B03P015B091R1_049.ab1   129 
  367    MoSU009F_H07_BE637663Ld02P015B03P015B091F1_049.ab1   199 
  391  C MoSU009R_H07_BE637663Ld02P015B03P015B091R1_049.ab1    85 
  411    MoSU009F_H07_BE637663Ld02P015B03P015B091F1_049.ab1   243 
Contig length: old 625, new 626

Contig length: old 626, new 626
New start: 0