No. words: 1649; after pruning: 1623


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:670)  649  0.15 0.30 0.00  MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1        1   670 (162)  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   (145)   672     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   817 
  168    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1    21 
  184  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   634 
  200    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1    53 
  204  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   614 
  208    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1    61 
  236  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   582 
  240    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1    93 
  672  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   146 
  680    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1   533 
  704  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1   114 
  724    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1   577 
  728  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1    90 
  780    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1   633 
  788  C MoSU008R_G05_BF201560Ld01P005G04G101R1_035.ab1    30 
  804    MoSU008F_G05_BF201560Ld01P005G04G101F1_035.ab1   657 
Contig length: old 978, new 979

Contig length: old 979, new 979
New start: 0