No. words: 1552; after pruning: 1526


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:669)  647  0.00 0.45 0.00  MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1        1   669 (132)  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1   (79)   672     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1   751 
  102    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1    21 
  114  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1   638 
  123    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1    41 
  127  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1   625 
  135    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1    53 
  171  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1   581 
  175    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1    93 
  515  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1   237 
  655    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1   573 
  671  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1    81 
  675    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1   593 
  679  C MoSU008R_F06_BF201560Ld08P005G04G101R1_038.ab1    73 
  735    MoSU008F_F06_BF201560Ld08P005G04G101F1_038.ab1   653 
Contig length: old 882, new 883

Contig length: old 883, new 883
New start: 0