No. words: 1006; after pruning: 980


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:458)  429  0.43 0.22 0.43  MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1        1   460 (49)  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   (38)   459     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   497 
  119    MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1    80 
  127  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   371 
  151    MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1   112 
  159  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   339 
  167    MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1   128 
  199  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   299 
  227    MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1   188 
  255  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   243 
  275    MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1   236 
  323  C MoSU028R_F07_BF201560Sn30P030A04P005G101R1_053.ab1   175 
  331    MoSU028F_F07_BF201560Sn30P030A04P005G101F1_053.ab1   292 
Contig length: old 547, new 548

Contig length: old 548, new 548
New start: 0