No. words: 627; after pruning: 601


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 4.0 (1,1:279)  267  0.00 0.00 0.36  MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1        5   280 (37)  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1   (35)   275     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1   310 
  111    MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1    80 
  127  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1   184 
  147    MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1   116 
  151  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1   160 
  159    MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1   128 
  167  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1   144 
  199    MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1   168 
  215  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1    96 
  227    MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1   196 
  271  C MoSU025R_G10_BF201560Ta17P030C05P005G101R1_068.ab1    40 
  275    MoSU025F_G10_BF201560Ta17P030C05P005G101F1_068.ab1   244 
Contig length: old 347, new 348

Contig length: old 348, new 348
New start: 0