No. words: 980; after pruning: 954


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:442)  429  0.00 0.23 0.00  MoSU025F_C06_BF201560Ta19P030A04P005G101F1_044.ab1        1   443 (54)  C MoSU025R_C06_BF201560Ta19P030A04P005G101R1_044.ab1   (39)   444     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C MoSU025R_C06_BF201560Ta19P030A04P005G101R1_044.ab1   483 
   98    MoSU025F_C06_BF201560Ta19P030A04P005G101F1_044.ab1    58 
  110  C MoSU025R_C06_BF201560Ta19P030A04P005G101R1_044.ab1   374 
  230    MoSU025F_C06_BF201560Ta19P030A04P005G101F1_044.ab1   190 
  258  C MoSU025R_C06_BF201560Ta19P030A04P005G101R1_044.ab1   226 
  386    MoSU025F_C06_BF201560Ta19P030A04P005G101F1_044.ab1   346 
  438  C MoSU025R_C06_BF201560Ta19P030A04P005G101R1_044.ab1    46 
  442    MoSU025F_C06_BF201560Ta19P030A04P005G101F1_044.ab1   402 
Contig length: old 537, new 537

Contig length: old 537, new 537
New start: 0