No. words: 975; after pruning: 949


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:442)  429  0.00 0.23 0.00  MoSU025F_B05_BF201560Td10P030A04P005G101F1_045.ab1        1   443 (52)  C MoSU025R_B05_BF201560Td10P030A04P005G101R1_045.ab1   (36)   444     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C MoSU025R_B05_BF201560Td10P030A04P005G101R1_045.ab1   480 
   91    MoSU025F_B05_BF201560Td10P030A04P005G101F1_045.ab1    54 
  107  C MoSU025R_B05_BF201560Td10P030A04P005G101R1_045.ab1   374 
  147    MoSU025F_B05_BF201560Td10P030A04P005G101F1_045.ab1   110 
  155  C MoSU025R_B05_BF201560Td10P030A04P005G101R1_045.ab1   326 
  223    MoSU025F_B05_BF201560Td10P030A04P005G101F1_045.ab1   186 
  359  C MoSU025R_B05_BF201560Td10P030A04P005G101R1_045.ab1   122 
  379    MoSU025F_B05_BF201560Td10P030A04P005G101F1_045.ab1   342 
Contig length: old 532, new 532

Contig length: old 532, new 532
New start: 0